Critical step – this high cell density is essential for thorough and complete activation of all T cells in the culture. If cells are to be stimulated for a long time-period (e.g. 16 h with protein antigen) then proceed directly to antigen stimulation. If cells are to be stimulated for a short time-period (e.g. 3 h with peptide), the cells may be stimulated immediately, or the cells may be cultured unstimulated overnight at 37°C, 5–7% CO2. Cells can then be stimulated with antigen the following morning. Troubleshooting– it is necessary to establish the optimal stimulation time for your antigen and the cytokine being examined: short (3–6 h) periods DAPT in vitro for
peptide stimulation are usually sufficient, while activation with proteins takes longer (6–16 h). Protein and peptides may be combined: add the
peptide to the culture during the last 3–6 h of the protein stimulation. Critical step– when assaying two cytokines together, a good knowledge of the kinetics of the production of both is required, and a compromise may need to be struck. Label cells with cytokine catch reagent. After stimulation, the cells should be transferred to a suitable container, e.g. tube to allow sufficient washing and cooling throughout the process. This depends upon the cell number being analysed, and the expected antigen frequency. Up to 1 × 107 cells with an antigen frequency of <5% can be processed in 15-ml tubes. Larger volumes should be scaled up accordingly.
Ensure Caspase phosphorylation maximum cell recovery by washing the cell culture vessel used for stimulation thoroughly Phospholipase D1 with cold buffer. If necessary use a cell scraper to collect all cells. Fill tube containing the cells with ice-cold buffer, centrifuge at 300 g for 10 min at 4°C. Remove supernatant completely. Critical step– the only thing stopping the cells from making cytokines at this point is keeping them ice-cold. Add warm (37°C) culture medium to dilute the cells to 105−106 cells/ml depending on the expected frequency of cytokine-secreting cells (among all cells): <1–5%: 1–2 × 106 cells/ml; 5–20%: 1–2 × 105 cells/ml; >20–50%: <105 cells/ml. Critical step – the tube for the secretion phase must have sufficient volume to allow the addition of at least an equivalent volume of cold buffer to stop the reaction at the end of the secretion phase. This may mean that the cell sample has to be divided among several tubes for the secretion phase. For example, 5 × 107 cells, secretion volume 50 ml. Use 2 × 50 ml tubes, 25 ml each during secretion phase. This will allow the addition of 25 ml cold buffer at the end of the secretion phase. Incubate cells for 45 min at 37°C under slow continuous agitation/rotation or mix tube every 5–10 min to avoid sedimentation of the cells. Stop the secretion reaction by adding a minimum of 1 vol of ice-cold buffer to the tube. Place tube on ice and incubate for 10 min to ensure that the sample is completely chilled.